Related Content
Search Google Scholar for:
|
|
Science 9 September 1988: Vol. 241. no. 4871, pp. 1335 - 1338 DOI: 10.1126/science.3413495
|
|
Articles
Science, Vol 241, Issue 4871, 1335-1338
Copyright © 1988 by American Association for the Advancement of Science
Physical analysis of transcription preinitiation complex assembly on a class II gene promoter
MW Van Dyke,
RG Roeder,
and
M Sawadogo
Laboratory of Biochemistry and Molecular Biology, Rockefeller University, New York, NY 10021.
Transcription of protein-encoding genes by human RNA polymerase II requires multiple ancillary proteins (transcription factors). Interactions between these proteins and the promoter DNA of a viral class II gene (the major late transcription unit of adenovirus) were investigated by enzymatic and chemical footprinting. The experiments indicated that the assembly of functionally active RNA polymerase II-containing transcription preinitiation complexes requires a complete set of transcription factors, and that both specific protein-DNA and protein-protein interactions are involved. This allows individual steps along the transcription reaction pathway to be tested directly, thus providing a basis for understanding basic transcription initiation mechanisms as well as the regulatory processes that act on them.
THIS ARTICLE HAS BEEN CITED BY OTHER ARTICLES:
- Functional Characterization of Core Promoter Elements: the Downstream Core Element Is Recognized by TAF1.
- D.-H. Lee, N. Gershenzon, M. Gupta, I. P. Ioshikhes, D. Reinberg, and B. A. Lewis (2005)
Mol. Cell. Biol.
25, 9674-9686
| Abstract »
| Full Text »
| PDF »
- Structural and Functional Characterization of PC2 and RNA Polymerase II-Associated Subpopulations of Metazoan Mediator.
- S. Malik, H. J. Baek, W. Wu, and R. G. Roeder (2005)
Mol. Cell. Biol.
25, 2117-2129
| Abstract »
| Full Text »
| PDF »
- Differential Cellular Requirements for Activation of Herpes Simplex Virus Type 1 Early (tk) and Late (gC) Promoters by ICP4.
- S. Zabierowski and N. A. DeLuca (2004)
J. Virol.
78, 6162-6170
| Abstract »
| Full Text »
| PDF »
- The Crystal Structure of CCG1/TAFII250-interacting Factor B (CIB).
- B. Padmanabhan, T. Kuzuhara, N. Adachi, and M. Horikoshi (2004)
J. Biol. Chem.
279, 9615-9624
| Abstract »
| Full Text »
| PDF »
- Evidence that TAF-TATA Box-Binding Protein Interactions Are Required for Activated Transcription in Mammalian Cells.
- L. S. Martel, H. J. Brown, and A. J. Berk (2002)
Mol. Cell. Biol.
22, 2788-2798
| Abstract »
| Full Text »
| PDF »
- TBP Dynamics in Living Human Cells: Constitutive Association of TBP with Mitotic Chromosomes.
- D. Chen, C. S. Hinkley, R. W. Henry, and S. Huang (2002)
Mol. Biol. Cell
13, 276-284
| Abstract »
| Full Text »
| PDF »
- Requirement for TAFII250 Acetyltransferase Activity in Cell Cycle Progression.
- E. L. Dunphy, T. Johnson, S. S. Auerbach, and E. H. Wang (2000)
Mol. Cell. Biol.
20, 1134-1139
| Abstract »
| Full Text »
- Cloning and Characterization of the Mouse Histone Deacetylase-2 Gene.
- Y. Zeng, C.-M. Tang, Y.-L. Yao, W.-M. Yang, and E. Seto (1998)
J. Biol. Chem.
273, 28921-28930
| Abstract »
| Full Text »
| PDF »
- FCP1, the RAP74-Interacting Subunit of a Human Protein Phosphatase That Dephosphorylates the Carboxyl-terminal Domain of RNA Polymerase IIO.
- J. Archambault, G. Pan, G. K. Dahmus, M. Cartier, N. Marshall, S. Zhang, M. E. Dahmus, and J. Greenblatt (1998)
J. Biol. Chem.
273, 27593-27601
| Abstract »
| Full Text »
| PDF »
- Molecular Genetics of the RNA Polymerase II General Transcriptional Machinery.
- M. Hampsey (1998)
Microbiol. Mol. Biol. Rev.
62, 465-503
| Abstract »
| Full Text »
| PDF »
- The mammalian transcriptional repressor RBP (CBF1) targets TFIID and TFIIA to prevent activated transcription.
- I. Olave, D. Reinberg, and L. D. Vales (1998)
Genes & Dev.
12, 1621-1637
| Abstract »
| Full Text »
- The RNA Polymerase II General Transcription Factors: Past, Present, and Future.
- D. REINBERG, G. ORPHANIDES, R. EBRIGHT, S. AKOULITCHEV, J. CARCAMO, H. CHO, P. CORTES, R. DRAPKIN, O. FLORES, I. HA, et al. (1998)
Cold Spring Harb Symp Quant Biol
63, 83-105
| Abstract »
| PDF »
- Heat Shock Factor Increases the Reinitiation Rate from Potentiated Chromatin Templates.
- R. Sandaltzopoulos and P. B. Becker (1998)
Mol. Cell. Biol.
18, 361-367
| Abstract »
| Full Text »
- Activation and the Role of Reinitiation in the Control of Transcription by RNA Polymerase II.
- S. HAHN (1998)
Cold Spring Harb Symp Quant Biol
63, 181-188
| Abstract »
| PDF »
- Role of General and Gene-specific Cofactors in the Regulation of Eukaryotic Transcription.
- R.G. ROEDER (1998)
Cold Spring Harb Symp Quant Biol
63, 201-218
| Abstract »
| PDF »
- Mechanisms of Viral Activators.
- A.J. BERK, T.G. BOYER, A.N. KAPANIDIS, R.H. EBRIGHT, N.N. KOBAYASHI, P.J. HORN, S.M. SULLIVAN, R. KOOP, M.A. SURBY, and S.J. TRIEZENBERG (1998)
Cold Spring Harb Symp Quant Biol
63, 243-252
| Abstract »
| PDF »
- Trajectory of DNA in the RNA polymerase II transcription preinitiation complex.
- T.-K. Kim, T. Lagrange, Y.-H. Wang, J. D. Griffith, D. Reinberg, and R. H. Ebright (1997)
PNAS
94, 12268-12273
| Abstract »
| Full Text »
| PDF »
- Promoter Escape by RNA Polymerase II. FORMATION OF AN ESCAPE-COMPETENT TRANSCRIPTIONAL INTERMEDIATE IS A PREREQUISITE FOR EXIT OF POLYMERASE FROM THE PROMOTER.
- A. Dvir, S. Tan, J. W. Conaway, and R. C. Conaway (1997)
J. Biol. Chem.
272, 28175-28178
| Abstract »
| Full Text »
| PDF »
- TAFII250-dependent transcription of cyclin A is directed by ATF activator proteins.
- E. H. Wang, S. Zou, and R. Tjian (1997)
Genes & Dev.
11, 2658-2669
| Abstract »
| Full Text »
| PDF »
- Interaction of Elongation Factors TFIIS and Elongin A with a Human RNA Polymerase II Holoenzyme Capable of Promoter-specific Initiation and Responsive to Transcriptional Activators.
- G. Pan, T. Aso, and J. Greenblatt (1997)
J. Biol. Chem.
272, 24563-24571
| Abstract »
| Full Text »
| PDF »
- Considerations of transcriptional control mechanisms: Do TFIID-core promoter complexes recapitulate nucleosome-like functions?.
- A. Hoffmann, T. Oelgeschlager, and R. G. Roeder (1997)
PNAS
94, 8928-8935
| Abstract »
| Full Text »
| PDF »
- TFII Is Required for Transcription of the Naturally TATA-less but Initiator-containing Vbeta Promoter.
- B. Manzano-Winkler, C. D. Novina, and A. L. Roy (1996)
J. Biol. Chem.
271, 12076-12081
| Abstract »
| Full Text »
| PDF »
- Transcription revisited: a commentary on the 1995 Cold Spring Harbor Laboratory meeting, "Mechanisms of Eukaryotic Transcription"..
- S L McKnight (1996)
Genes & Dev.
10, 367-381
| PDF »
- Recycling of the general transcription factors during RNA polymerase II transcription..
- L Zawel, K P Kumar, and D Reinberg (1995)
Genes & Dev.
9, 1479-1490
| Abstract »
| PDF »
- Drosophila TFIIA directs cooperative DNA binding with TBP and mediates transcriptional activation..
- K Yokomori, M P Zeidler, J L Chen, C P Verrijzer, M Mlodzik, and R Tjian (1994)
Genes & Dev.
8, 2313-2323
| Abstract »
| PDF »
- Mot1, a global repressor of RNA polymerase II transcription, inhibits TBP binding to DNA by an ATP-dependent mechanism..
- D T Auble, K E Hansen, C G Mueller, W S Lane, J Thorner, and S Hahn (1994)
Genes & Dev.
8, 1920-1934
| Abstract »
| PDF »
- TFIID sequence recognition of the initiator and sequences farther downstream in Drosophila class II genes..
- B A Purnell, P A Emanuel, and D S Gilmour (1994)
Genes & Dev.
8, 830-842
| Abstract »
| PDF »
- Drosophila TFIIA-L is processed into two subunits that are associated with the TBP/TAF complex..
- K Yokomori, A Admon, J A Goodrich, J L Chen, and R Tjian (1993)
Genes & Dev.
7, 2235-2245
| Abstract »
| PDF »
- TBP, a universal eukaryotic transcription factor?.
- N Hernandez (1993)
Genes & Dev.
7, 1291-1308
| PDF »
- An ATP-dependent inhibitor of TBP binding to DNA..
- D T Auble and S Hahn (1993)
Genes & Dev.
7, 844-856
| Abstract »
| PDF »
- DNA repair and transcription: the helicase connection.
- S Buratowski (1993)
Science
260, 37-38
| PDF »
- Synergism in transcriptional activation: a kinetic view..
- D Herschlag and F B Johnson (1993)
Genes & Dev.
7, 173-179
| PDF »
- The VP16 transcription activation domain is functional when targeted to a promoter-proximal RNA sequence..
- L S Tiley, S J Madore, M H Malim, and B R Cullen (1992)
Genes & Dev.
6, 2077-2087
| Abstract »
| PDF »
- Differential regulation of transcription preinitiation complex assembly by activator and repressor homeo domain proteins..
- F B Johnson and M A Krasnow (1992)
Genes & Dev.
6, 2177-2189
| Abstract »
| PDF »
- Promoter melting and TFIID complexes on Drosophila genes in vivo..
- C Giardina, M Perez-Riba, and J T Lis (1992)
Genes & Dev.
6, 2190-2200
| Abstract »
| PDF »
- Holo-TFIID supports transcriptional stimulation by diverse activators and from a TATA-less promoter..
- Q Zhou, P M Lieberman, T G Boyer, and A J Berk (1992)
Genes & Dev.
6, 1964-1974
| Abstract »
| PDF »
- The acidic activator GAL4-AH can stimulate polymerase II transcription by promoting assembly of a closed complex requiring TFIID and TFIIA..
- W Wang, J D Gralla, and M Carey (1992)
Genes & Dev.
6, 1716-1727
| Abstract »
| PDF »
- SPT3 interacts with TFIID to allow normal transcription in Saccharomyces cerevisiae..
- D M Eisenmann, K M Arndt, S L Ricupero, J W Rooney, and F Winston (1992)
Genes & Dev.
6, 1319-1331
| Abstract »
| PDF »
- DNA binding provides a signal for phosphorylation of the RNA polymerase II heptapeptide repeats..
- S R Peterson, A Dvir, C W Anderson, and W S Dynan (1992)
Genes & Dev.
6, 426-438
| Abstract »
| PDF »
- Transcription factor IID mutants defective for interaction with transcription factor IIA.
- S Buratowski and H Zhou (1992)
Science
255, 1130-1132
| Abstract »
| PDF »
- TFIID can be rate limiting in vivo for TATA-containing, but not TATA-lacking, RNA polymerase II promoters..
- J Colgan and J L Manley (1992)
Genes & Dev.
6, 304-315
| Abstract »
| PDF »
- Polymerase II promoter activation: closed complex formation and ATP-driven start site opening.
- W Wang, M Carey, and J. Gralla (1992)
Science
255, 450-453
| Abstract »
| PDF »
- Coactivators for a proline-rich activator purified from the multisubunit human TFIID complex..
- N Tanese, B F Pugh, and R Tjian (1991)
Genes & Dev.
5, 2212-2224
| Abstract »
| PDF »
- RNA polymerase II carboxy-terminal domain contributes to the response to multiple acidic activators in vitro..
- S M Liao, I C Taylor, R E Kingston, and R A Young (1991)
Genes & Dev.
5, 2431-2440
| Abstract »
| PDF »
- The Zta trans-activator protein stabilizes TFIID association with promoter DNA by direct protein-protein interaction..
- P M Lieberman and A J Berk (1991)
Genes & Dev.
5, 2441-2454
| Abstract »
| PDF »
- The cloned RNA polymerase II transcription factor IID selects RNA polymerase III to transcribe the human U6 gene in vitro..
- S M Lobo, J Lister, M L Sullivan, and N Hernandez (1991)
Genes & Dev.
5, 1477-1489
| Abstract »
| PDF »
- Repression of HIV-1 transcription by a cellular protein.
- H Kato, M Horikoshi, and R. Roeder (1991)
Science
251, 1476-1479
| Abstract »
| PDF »
- A plant DNA-binding protein increases the number of active preinitiation complexes in a human in vitro transcription system..
- F Katagiri, K Yamazaki, M Horikoshi, R G Roeder, and N H Chua (1990)
Genes & Dev.
4, 1899-1909
| Abstract »
| PDF »
- A TATA-like sequence located downstream of the transcription initiation site is required for expression of an RNA polymerase II transcribed gene..
- J Carcamo, E Maldonado, P Cortes, M H Ahn, I Ha, Y Kasai, J Flint, and D Reinberg (1990)
Genes & Dev.
4, 1611-1622
| Abstract »
| PDF »
- Cloning of the Schizosaccharomyces pombe TFIID gene reveals a strong conservation of functional domains present in Saccharomyces cerevisiae TFIID..
- A Hoffmann, M Horikoshi, C K Wang, S Schroeder, P A Weil, and R G Roeder (1990)
Genes & Dev.
4, 1141-1148
| Abstract »
| PDF »
- Functional domains and upstream activation properties of cloned human TATA binding protein.
- M. Peterson, N Tanese, B. Pugh, and R Tjian (1990)
Science
248, 1625-1630
| Abstract »
| PDF »
- Cloning of a transcriptionally active human TATA binding factor.
- C. Kao, P. Lieberman, M. Schmidt, Q Zhou, R Pei, and A. Berk (1990)
Science
248, 1646-1650
| Abstract »
| PDF »
- Sarkosyl defines three intermediate steps in transcription initiation by RNA polymerase III: application to stimulation of transcription by E1A..
- R Kovelman and R G Roeder (1990)
Genes & Dev.
4, 646-658
| Abstract »
| PDF »
- DNA regions that regulate the ovarian transcriptional specificity of Drosophila yolk protein genes..
- S K Logan, M J Garabedian, and P C Wensink (1989)
Genes & Dev.
3, 1453-1461
| Abstract »
| PDF »
- The role of cis-acting promoter elements in tissue-specific albumin gene expression.
- P Maire, J Wuarin, and U Schibler (1989)
Science
244, 343-346
| Abstract »
| PDF »
- The coactivator dTAFII110/hTAFII135 is sufficient to recruit a polymerase complex and activate basal transcription mediated by CREB.
- E. A. Felinski and P. G. Quinn (2001)
PNAS
98, 13078-13083
| Abstract »
| Full Text »
| PDF »
|
|