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Science 14 August 1992:
Vol. 257. no. 5072, pp. 919 - 927
DOI: 10.1126/science.1323877

Articles

Science, Vol 257, Issue 5072, 919-927
Copyright © 1992 by American Association for the Advancement of Science


articles

Crystal structures of two viral peptides in complex with murine MHC class I H-2Kb

DH Fremont, M Matsumura, EA Stura, PA Peterson, and IA Wilson

Department of Molecular Biology, Scripps Research Institute, La Jolla, CA 92037.

The x-ray structures of a murine MHC class I molecule (H-2Kb) were determined in complex with two different viral peptides, derived from the vesicular stomatitis virus nucleoprotein (52-59), VSV-8, and the Sendai virus nucleoprotein (324-332), SEV-9. The H-2Kb complexes were refined at 2.3 A for VSV-8 and 2.5 A for SEV-9. The structure of H-2Kb exhibits a high degree of similarity with human HLA class I, although the individual domains can have slightly altered dispositions. Both peptides bind in extended conformations with most of their surfaces buried in the H-2Kb binding groove. The nonamer peptide maintains the same amino- and carboxyl-terminal interactions as the octamer primarily by the insertion of a bulge in the center of an otherwise beta conformation. Most of the specific interactions are between side-chain atoms of H-2Kb and main-chain atoms of peptide. This binding scheme accounts in large part for the enormous diversity of peptide sequences that bind with high affinity to class I molecules. Small but significant conformational changes in H-2Kb are associated with peptide binding, and these synergistic movements may be an integral part of the T cell receptor recognition process.


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Water dynamics at the binding interface of four different HLA-A2-peptide complexes.
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J. Immunol. 164, 3519-3526
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A. M. Kalergis, T. Ono, F. Wang, T. P. DiLorenzo, S. Honda, and S. G. Nathenson (1999)
J. Immunol. 162, 7263-7270
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A novel recognition motif of human NKT antigen receptor for a glycolipid ligand.
T. Kawano, Y. Tanaka, E. Shimizu, Y. Kaneko, N. Kamata, H. Sato, H. Osada, S. Sekiya, T. Nakayama, and M. Taniguchi (1999)
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Recognition of an MHC Class I-Restricted Antigenic Peptide Can Be Modulated by para-Substitution of Its Buried Tyrosine Residues in a TCR-Specific Manner.
N. G. Saito, H.-C. Chang, and Y. Paterson (1999)
J. Immunol. 162, 5998-6008
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Dramatic Influence of V{beta} Gene Polymorphism on an Antigen-Specific CD8+ T Cell Response In Vivo.
H. Bour, O. Michielin, P. Bousso, J.-C. Cerottini, and H. R. MacDonald (1999)
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Role of Peptide Backbone in T Cell Recognition.
S. Calbo, G. Guichard, P. Bousso, S. Muller, P. Kourilsky, J.-P. Briand, and J.-P. Abastado (1999)
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Specific Proteolytic Cleavages Limit the Diversity of the Pool of Peptides Available to MHC Class I Molecules in Living Cells.
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Fine Specificity and MHC Restriction of Trinitrophenyl- Specific CTL.
A. Franco, T. Yokoyama, D. Huynh, C. Thomson, S. G. Nathenson, and H. M. Grey (1999)
J. Immunol. 162, 3388-3394
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Peptide dependency of alloreactive CD4+ T cell responses.
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J. Immunol. 161, 5481-5490
   Abstract »    Full Text »    PDF »
A Molecular Basis for How a Single TCR Interfaces Multiple Ligands.
A. Boesteanu, M. Brehm, L. M. Mylin, G. J. Christianson, S. S. Tevethia, D. C. Roopenian, and S. Joyce (1998)
J. Immunol. 161, 4719-4727
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The Importance of Pairwise Interactions Between Peptide Residues in the Delineation of TCR Specificity.
G. R. Leggatt, A. Hosmalin, C. D. Pendleton, A. Kumar, S. Hoffman, and J. A. Berzofsky (1998)
J. Immunol. 161, 4728-4735
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New Synthetic Non-peptide Ligands for Classical Major Histocompatibility Complex Class I Molecules.
A. Bianco, C. Brock, C. Zabel, T. Walk, P. Walden, and G. Jung (1998)
J. Biol. Chem. 273, 28759-28765
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Large Protein Fragments as Substrates for Endocytic Antigen Capture by MHC Class II Molecules.
F. Castellino, F. Zappacosta, J. E. Coligan, and R. N. Germain (1998)
J. Immunol. 161, 4048-4057
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The MHC Class I-Restricted Immune Response to HIV-gag in BALB/c Mice Selects a Single Epitope That Does Not Have a Predictable MHC-Binding Motif and Binds to Kd Through Interactions Between a Glutamine at P3 and Pocket D.
M. Mata, P. J. Travers, Q. Liu, F. R. Frankel, and Y. Paterson (1998)
J. Immunol. 161, 2985-2993
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Differential thymic selection outcomes stimulated by focal structural alteration in peptide/major histocompatibility complex ligands.
Y. Ghendler, M.-k. Teng, J.-h. Liu, T. Witte, J. Liu, K. S. Kim, P. Kern, H.-C. Chang, J.-h. Wang, and E. L. Reinherz (1998)
PNAS 95, 10061-10066
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Subtle conformational changes induced in major histocompatibility complex class II molecules by binding peptides.
A. V. Chervonsky, R. M. Medzhitov, L. K. Denzin, A. K. Barlow, A. Yu. Rudensky, and C. A. Janeway Jr. (1998)
PNAS 95, 10094-10099
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NK Cells Can Recognize Different Forms of Class I MHC.
R.-C. Su, S. K. P. Kung, J. Gariepy, B. H. Barber, and R. G. Miller (1998)
J. Immunol. 161, 755-766
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Anti-MUC1 Antibodies React Directly with MUC1 Peptides Presented by Class I H2 and HLA Molecules.
V. Apostolopoulos, G. Chelvanayagam, P.-X. Xing, and I. F. C. McKenzie (1998)
J. Immunol. 161, 767-775
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