Note to users. If you're seeing this message, it means that your browser cannot find this page's style/presentation instructions -- or possibly that you are using a browser that does not support current Web standards. Find out more about why this message is appearing, and what you can do to make your experience of our site the best it can be.

Site Tools

  • AAAS
  • Subscribe
  • Feedback

Site Search

Search Advanced

Science 6 August 1993:
Vol. 261. no. 5122, pp. 715 - 725
DOI: 10.1126/science.8342038

Articles

Science, Vol 261, Issue 5122, 715-725
Copyright © 1993 by American Association for the Advancement of Science


articles

Transition metals in control of gene expression

TV O'Halloran

Department of Chemistry, Northwestern University, Evanston, IL 60208-3113.

Metalloproteins play structural and catalytic roles in gene expression. The metalloregulatory proteins are a subclass that exerts metal-responsive control of genes involved in respiration, metabolism, and metal-specific homeostasis or stress-response systems, such as iron uptake and storage, copper efflux, and mercury detoxification. Two allosteric mechanisms for control of gene expression were first discovered in metalloregulatory systems: an iron-responsive translational control mechanism for ferritin production and a mercury-responsive DNA-distortion mechanism for transcriptional control of detoxification genes. These otherwise unrelated mechanisms give rise to a rapid physiological response when metal ion concentrations exceed a dangerous threshold. Molecular recognition in these allosteric metal ion receptors is achieved through atypical coordination geometries, cluster formation, or complexes with prosthetic groups, such as sulfide and heme. Thus, many of the inorganic assemblies that otherwise buttress the structure of biopolymers or catalyze substrate transformation in active sites of enzymes have also been adapted to serve sensor functions in the metalloregulatory proteins. Mechanistic studies of these metal-sensor protein interactions are providing new insights into fundamental aspects of inorganic chemistry, molecular biology, and cellular physiology.


THIS ARTICLE HAS BEEN CITED BY OTHER ARTICLES:
Copper sensing function of Drosophila metal-responsive transcription factor-1 is mediated by a tetranuclear Cu(I) cluster.
X. Chen, H. Hua, K. Balamurugan, X. Kong, L. Zhang, G. N. George, O. Georgiev, W. Schaffner, and D. P. Giedroc (2008)
Nucleic Acids Res. 36, 3128-3138
   Abstract »    Full Text »    PDF »
Global Analysis of the Mycobacterium tuberculosis Zur (FurB) Regulon.
A. Maciag, E. Dainese, G. M. Rodriguez, A. Milano, R. Provvedi, M. R. Pasca, I. Smith, G. Palu, G. Riccardi, and R. Manganelli (2007)
J. Bacteriol. 189, 730-740
   Abstract »    Full Text »    PDF »
Mapping Essential Domains of Mycobacterium smegmatis WhmD: Insights into WhiB Structure and Function..
T. R. Raghunand and W. R. Bishai (2006)
J. Bacteriol. 188, 6966-6976
   Abstract »    Full Text »    PDF »
Differential Gene Expression in Response to Exposure to Antimycobacterial Agents and Other Stress Conditions among Seven Mycobacterium tuberculosis whiB-Like Genes..
D. E. Geiman, T. R. Raghunand, N. Agarwal, and W. R. Bishai (2006)
Antimicrob. Agents Chemother. 50, 2836-2841
   Abstract »    Full Text »    PDF »
A systems view of haloarchaeal strategies to withstand stress from transition metals.
A. Kaur, M. Pan, M. Meislin, M. T. Facciotti, R. El-Gewely, and N. S. Baliga (2006)
Genome Res. 16, 841-854
   Abstract »    Full Text »    PDF »
Identification of a Copper-Inducible Promoter for Use in Ectopic Expression in the Fungal Pathogen Histoplasma capsulatum.
D. Gebhart, A. K. Bahrami, and A. Sil (2006)
Eukaryot. Cell 5, 935-944
   Abstract »    Full Text »    PDF »
Transcriptional profiling of Mycoplasma hyopneumoniae during iron depletion using microarrays..
M. L. Madsen, D. Nettleton, E. L. Thacker, and F. C. Minion (2006)
Microbiology 152, 937-944
   Abstract »    Full Text »    PDF »
Induction of cellular prion protein gene expression by copper in neurons.
L. Varela-Nallar, E. M. Toledo, L. F. Larrondo, A. L. B. Cabral, V. R. Martins, and N. C. Inestrosa (2006)
Am J Physiol Cell Physiol 290, C271-C281
   Abstract »    Full Text »    PDF »
Motexafin Gadolinium and Zinc Induce Oxidative Stress Responses and Apoptosis in B-Cell Lymphoma Lines.
P. S. Lecane, M. W. Karaman, M. Sirisawad, L. Naumovski, R. A. Miller, J. G. Hacia, and D. Magda (2005)
Cancer Res. 65, 11676-11688
   Abstract »    Full Text »    PDF »
On the Competition for Available Zinc.
U. Heinz, M. Kiefer, A. Tholey, and H.-W. Adolph (2005)
J. Biol. Chem. 280, 3197-3207
   Abstract »    Full Text »    PDF »
Environmental Boron Exposure and Activity of {delta}-Aminolevulinic Acid Dehydratase (ALA-D) in a Newborn Population.
G. Huel, C. Yazbeck, D. Burnel, P. Missy, and W. Kloppmann (2004)
Toxicol. Sci. 80, 304-309
   Abstract »    Full Text »    PDF »
Splicing Factor hSlu7 Contains a Unique Functional Domain Required to Retain the Protein within the Nucleus.
N. Shomron, M. Reznik, and G. Ast (2004)
Mol. Biol. Cell 15, 3782-3795
   Abstract »    Full Text »    PDF »
From the Cover: A tautomeric zinc sensor for ratiometric fluorescence imaging: Application to nitric oxide-induced release of intracellular zinc.
C. J. Chang, J. Jaworski, E. M. Nolan, M. Sheng, and S. J. Lippard (2004)
PNAS 101, 1129-1134
   Abstract »    Full Text »    PDF »
Crystal Structure of Human Pirin: AN IRON-BINDING NUCLEAR PROTEIN AND TRANSCRIPTION COFACTOR.
H. Pang, M. Bartlam, Q. Zeng, H. Miyatake, T. Hisano, K. Miki, L.-L. Wong, G. F. Gao, and Z. Rao (2004)
J. Biol. Chem. 279, 1491-1498
   Abstract »    Full Text »    PDF »
Role and regulation of the superoxide dismutases of Staphylococcus aureus.
M. H. Karavolos, M. J. Horsburgh, E. Ingham, and S. J. Foster (2003)
Microbiology 149, 2749-2758
   Abstract »    Full Text »    PDF »
The Acrodermatitis Enteropathica Gene ZIP4 Encodes a Tissue-specific, Zinc-regulated Zinc Transporter in Mice.
J. Dufner-Beattie, F. Wang, Y.-M. Kuo, J. Gitschier, D. Eide, and G. K. Andrews (2003)
J. Biol. Chem. 278, 33474-33481
   Abstract »    Full Text »    PDF »
Transition Metal Speciation in the Cell: Insights from the Chemistry of Metal Ion Receptors.
L. A. Finney and T. V. O'Halloran (2003)
Science 300, 931-936
   Abstract »    Full Text »    PDF »
Bioinorganic Chemistry Special Feature: Structural elements of metal selectivity in metal sensor proteins.
M. A. Pennella, J. E. Shokes, N. J. Cosper, R. A. Scott, and D. P. Giedroc (2003)
PNAS 100, 3713-3718
   Abstract »    Full Text »    PDF »
A Nickel-Cobalt-sensing ArsR-SmtB Family Repressor. CONTRIBUTIONS OF CYTOSOL AND EFFECTOR BINDING SITES TO METAL SELECTIVITY.
J. S. Cavet, W. Meng, M. A. Pennella, R. J. Appelhoff, D. P. Giedroc, and N. J. Robinson (2002)
J. Biol. Chem. 277, 38441-38448
   Abstract »    Full Text »    PDF »
Regulation of the Bacillus subtilis fur and perR Genes by PerR: Not All Members of the PerR Regulon Are Peroxide Inducible.
M. Fuangthong, A. F. Herbig, N. Bsat, and J. D. Helmann (2002)
J. Bacteriol. 184, 3276-3286
   Abstract »    Full Text »    PDF »
Metallochaperones and Metal-Transporting ATPases: A Comparative Analysis of Sequences and Structures.
F. Arnesano, L. Banci, I. Bertini, S. Ciofi-Baffoni, E. Molteni, D. L. Huffman, and T. V. O'Halloran (2002)
Genome Res. 12, 255-271
   Abstract »    Full Text »    PDF »
Phosphorylation Is Involved in the Activation of Metal-regulatory Transcription Factor 1 in Response to Metal Ions.
O. LaRochelle, V. Gagne, J. Charron, J.-W. Soh, and C. Seguin (2001)
J. Biol. Chem. 276, 41879-41888
   Abstract »    Full Text »    PDF »
Zinc-Metallothionein Levels Are Correlated with Enhanced Glucocorticoid Responsiveness in Mouse Cells Exposed to ZnCl2, HgCl2, and Heat Shock.
J. M. DeMoor, W. A. Kennette, O. M. Collins, and J. Koropatnick (2001)
Toxicol. Sci. 64, 67-76
   Abstract »    Full Text »    PDF »
Effects of intracellular zinc depletion on metallothionein and ZIP2 transporter expression and apoptosis.
J. Cao, J. A. Bobo, J. P. Liuzzi, and R. J. Cousins (2001)
J. Leukoc. Biol. 70, 559-566
   Abstract »    Full Text »    PDF »
PerR Controls Oxidative Stress Resistance and Iron Storage Proteins and Is Required for Virulence in Staphylococcus aureus.
M. J. Horsburgh, M. O. Clements, H. Crossley, E. Ingham, and S. J. Foster (2001)
Infect. Immun. 69, 3744-3754
   Abstract »    Full Text »    PDF »
Genome of the Extremely Radiation-Resistant Bacterium Deinococcus radiodurans Viewed from the Perspective of Comparative Genomics.
K. S. Makarova, L. Aravind, Y. I. Wolf, R. L. Tatusov, K. W. Minton, E. V. Koonin, and M. J. Daly (2001)
Microbiol. Mol. Biol. Rev. 65, 44-79
   Abstract »    Full Text »    PDF »
Activation of Silent gal Genes in the lac-gal Regulon of Streptococcus thermophilus.
E. E. Vaughan, P. T. C. van den Bogaard, P. Catzeddu, O. P. Kuipers, and W. M. de Vos (2001)
J. Bacteriol. 183, 1184-1194
   Abstract »    Full Text »
Tissue-Specific Gene Expression Identifies a Gene in the Lysogenic Phage Gifsy-1 That Affects Salmonella enterica Serovar Typhimurium Survival in Peyer's Patches.
T. L. Stanley, C. D. Ellermeier, and J. M. Slauch (2000)
J. Bacteriol. 182, 4406-4413
   Abstract »    Full Text »
The Dynamic Link between the Integrity of the Immune System and Zinc Status.
P. J. Fraker, L. E. King, T. Laakko, and T. L. Vollmer (2000)
J. Nutr. 130, 1399S-1406
   Abstract »    Full Text »
Zinc and Cadmium Can Promote Rapid Nuclear Translocation of Metal Response Element-binding Transcription Factor-1.
I. V. Smirnova, D. C. Bittel, R. Ravindra, H. Jiang, and G. K. Andrews (2000)
J. Biol. Chem. 275, 9377-9384
   Abstract »    Full Text »    PDF »
Multiple paralogous genes related to the Streptomyces coelicolor developmental regulatory gene whiB are present in Streptomyces and other actinomycetes.
J. A. Soliveri, J. Gomez, W. R. Bishai, and K. F. Chater (2000)
Microbiology 146, 333-343
   Abstract »    Full Text »
DNA Distortion Mechanism for Transcriptional Activation by ZntR, a Zn(II)-responsive MerR Homologue in Escherichia coli.
C. E. Outten, F. W. Outten, and T. V. O'Halloran (1999)
J. Biol. Chem. 274, 37517-37524
   Abstract »    Full Text »    PDF »
Early Copper-Induced Leakage of K+ from Arabidopsis Seedlings Is Mediated by Ion Channels and Coupled to Citrate Efflux.
A. S. Murphy, W. R. Eisinger, J. E. Shaff, L. V. Kochian, and L. Taiz (1999)
Plant Physiology 121, 1375-1382
   Abstract »    Full Text »
Mercury Resistance in Bacillus cereus RC607: Transcriptional Organization and Two New Open Reading Frames.
A. Gupta, L. T. Phung, L. Chakravarty, and S. Silver (1999)
J. Bacteriol. 181, 7080-7086
   Abstract »    Full Text »
Use of Heme-Protein Complexes by the Yersinia enterocolitica HemR Receptor: Histidine Residues Are Essential for Receptor Function.
C. S. Bracken, M. T. Baer, A. Abdur-Rashid, W. Helms, and I. Stojiljkovic (1999)
J. Bacteriol. 181, 6063-6072
   Abstract »    Full Text »
Cobalt-dependent Transcriptional Switching by a Dual-effector MerR-like Protein Regulates a Cobalt-exporting Variant CPx-type ATPase.
J. C. Rutherford, J. S. Cavet, and N. J. Robinson (1999)
J. Biol. Chem. 274, 25827-25832
   Abstract »    Full Text »    PDF »
Cd(II)-Responsive and Constitutive Mutants Implicate a Novel Domain in MerR.
J. J. Caguiat, A. L. Watson, and A. O. Summers (1999)
J. Bacteriol. 181, 3462-3471
   Abstract »    Full Text »
Iron Reductase for Magnetite Synthesis in the Magnetotactic Bacterium Magnetospirillum magnetotacticum.
Y. Noguchi, T. Fujiwara, K. Yoshimatsu, and Y. Fukumori (1999)
J. Bacteriol. 181, 2142-2147
   Abstract »    Full Text »
A Carboxyl-terminal Cys2/His2-type Zinc-finger Motif in DNA Primase Influences DNA Content in Synechococcus PCC 7942.
A. J. Bird, J. S. Turner-Cavet, J. H. Lakey, and N. J. Robinson (1998)
J. Biol. Chem. 273, 21246-21252
   Abstract »    Full Text »    PDF »
Expression, Purification, and Metal Binding Properties of the N-terminal Domain from the Wilson Disease Putative Copper-transporting ATPase (ATP7B).
M. DiDonato, S. Narindrasorasak, J. R. Forbes, D. W. Cox, and B. Sarkar (1997)
J. Biol. Chem. 272, 33279-33282
   Abstract »    Full Text »    PDF »
The zntA gene of Escherichia coli encodes a Zn(II)-translocating P-type ATPase.
C. Rensing, B. Mitra, and B. P. Rosen (1997)
PNAS 94, 14326-14331
   Abstract »    Full Text »    PDF »
HgCl2-induced Interleukin-4 Gene Expression in T Cells Involves a Protein Kinase C-dependent Calcium Influx through L-type Calcium Channels.
A. Badou, M. Savignac, M. Moreau, C. Leclerc, R. Pasquier, P. Druet, and L. Pelletier (1997)
J. Biol. Chem. 272, 32411-32418
   Abstract »    Full Text »    PDF »
Measurement of Intracellular Free Zinc in Living Cortical Neurons: Routes of Entry.
S. L. Sensi, L. M. T. Canzoniero, S. P. Yu, H. S. Ying, J.-Y. Koh, G. A. Kerchner, and D. W. Choi (1997)
J. Neurosci. 17, 9554-9564
   Abstract »    Full Text »    PDF »
Crystal structures of the copper and nickel complexes of RNase A: Metal-induced interprotein interactions and identification of a novel copper binding motif.
R. Balakrishnan, N. Ramasubbu, K. I. Varughese, and R. Parthasarathy (1997)
PNAS 94, 9620-9625
   Abstract »    Full Text »    PDF »
Redox Modulation of Iron Regulatory Proteins by Peroxynitrite.
C. Bouton, H. Hirling, and J.-C. Drapier (1997)
J. Biol. Chem. 272, 19969-19975
   Abstract »    Full Text »    PDF »
Tissue-specific regulation of iron metabolism and heme synthesis: distinct control mechanisms in erythroid cells.
P Ponka (1997)
Blood 89, 1-25
   Abstract »    Full Text »
A Novel Gene Cluster Including the Rhodococcus rhodochrous J1 nhlBA Genes Encoding a Low Molecular Mass Nitrile Hydratase (L-NHase) Induced by Its Reaction Product.
H. Komeda, M. Kobayashi, and S. Shimizu (1996)
J. Biol. Chem. 271, 15796-15802
   Abstract »    Full Text »    PDF »
Induction of Ferritin Synthesis in Cells Infected with Mengo Virus.
M. R. Mulvey, L. C. Kühn, and D. G. Scraba (1996)
J. Biol. Chem. 271, 9851-9857
   Abstract »    Full Text »    PDF »
Oxidative stress induced heat shock factor phosphorylation and HSF-dependent activation of yeast metallothionein gene transcription..
X D Liu and D J Thiele (1996)
Genes & Dev. 10, 592-603
   Abstract »    PDF »
Selective Oxidative Modification and Affinity Cleavage of Pigeon Liver Malic Enzyme by the Cu[IMAGE]-Ascorbate System.
W.-Y. Chou, W.-P. Tsai, C.-C. Lin, and G.-G. Chang (1995)
J. Biol. Chem. 270, 25935-25941
   Abstract »    Full Text »    PDF »
Phorbol Esters Stimulate Non-transferrin Iron Uptake by K562 Cells.
T. Akompong, R. S. Inman, and M. Wessling-Resnick (1995)
J. Biol. Chem. 270, 20937-20941
   Abstract »    Full Text »    PDF »
Mercury-199 NMR of the metal receptor site in MerR and its protein-DNA complex.
L. Utschig, J. Bryson, and T. O'Halloran (1995)
Science 268, 380-385
   Abstract »    PDF »
Excess Copper and Ceruloplasmin Biosynthesis in Long-term Cultured Hepatocytes from Long-Evans Cinnamon (LEC) Rats, a Model of Wilson Disease.
K. Nakamura, F. Endo, T. Ueno, H. Awata, A. Tanoue, and I. Matsuda (1995)
J. Biol. Chem. 270, 7656-7660
   Abstract »    Full Text »    PDF »
Excitation-Transcription Coupling Mediated by Zinc Influx through Voltage-dependent Calcium Channels.
D. Atar, P. H. Backx, M. M. Appel, W. D. Gao, and E. Marban (1995)
J. Biol. Chem. 270, 2473-2477
   Abstract »    Full Text »    PDF »
Characterization of a unique protein component of yeast RNase MRP: an RNA-binding protein with a zinc-cluster domain..
M E Schmitt and D A Clayton (1994)
Genes & Dev. 8, 2617-2628
   Abstract »    PDF »
Bioinorganic chemistry: a maturing frontier.
S. Lippard (1993)
Science 261, 699-700
   PDF »
Metalloenzymes, structural motifs, and inorganic models.
K. Karlin (1993)
Science 261, 701-708
   Abstract »    PDF »
Physical Interaction of CcmC with Heme and the Heme Chaperone CcmE during Cytochrome c Maturation.
Q. Ren and L. Thony-Meyer (2001)
J. Biol. Chem. 276, 32591-32596
   Abstract »    Full Text »    PDF »
Measurement of Intracellular Free Zinc Concentrations Accompanying Zinc-Induced Neuronal Death.
L. M. T. Canzoniero, D. M. Turetsky, and D. W. Choi (1999)
J. Neurosci. 19, RC31
   Abstract »    Full Text »    PDF »



ADVERTISEMENT
Click Me!

ADVERTISEMENT
Click Me!

To Advertise     Find Products


Science. ISSN 0036-8075 (print), 1095-9203 (online)